Publications

You can also find my articles on my Google Scholar profile.

Preprints


Subject-Specific Analysis of Self-Initiated Attention Shifts from EEG with Controlled Internal and External Attention Conditions

Published in arXiv preprint, 2026

We analyze self-initiated attention shifts in EEG using subject-level machine learning, combining frequency-specific topographic patterns with SHAP feature attribution. Higher-frequency bands and frontal regions contribute most to within-subject classification.

Recommended citation: Zeng, Y., Hou, D., Zhang, Z., Sun, S., Huang, Y., Tseng, C., & Shioiri, S. (2026). Subject-Specific Analysis of Self-Initiated Attention Shifts from EEG with Controlled Internal and External Attention Conditions. arXiv preprint arXiv:2605.18251.
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Same Brain, Different Prediction: How Preprocessing Choices Undermine EEG Decoding Reliability

Published in arXiv preprint, 2026

Across six datasets and four paradigms, up to 42% of trial-level EEG predictions flip when only the preprocessing pipeline changes. We introduce Walsh-Hadamard decomposition to characterize sensitivity, Preprocessing Uncertainty as a diagnostic, and Normalized Adaptive PGI as a regularization fix.

Recommended citation: Hou, D., Wu, Z., Jiang, L., Li, Z., Lin, F., & Yamada, K. D. (2026). Same Brain, Different Prediction: How Preprocessing Choices Undermine EEG Decoding Reliability. arXiv preprint arXiv:2605.07212.
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Vibe Medicine: Redefining Biomedical Research Through Human-AI Co-Work

Published in arXiv preprint (under review at Meta-Radiology), 2026

A framework where clinicians and researchers direct skill-augmented AI agents through natural language to execute complex biomedical workflows. Case studies span rare disease diagnosis, drug repurposing, and clinical trial design across a curated library of 1,000+ medical skills.

Recommended citation: Wu, Z., Xu, S., Chen, B., Wan, S., Li, Y., Ruan, W., Lyu, Y., Li, S., Zhu, D., Liu, T., & Zhao, L. (2026). Vibe Medicine: Redefining Biomedical Research Through Human-AI Co-Work. arXiv preprint arXiv:2604.23674.
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WMF-AM: Probing LLM Working Memory via Depth-Parameterized Cumulative State Tracking

Published in arXiv preprint, 2026

We introduce Working Memory Fidelity-Active Manipulation (WMF-AM), a probe of cumulative state tracking that isolates within-pass cumulative load by parameterizing depth K. Testing 20 open-weight models (0.5B–35B) across 13 families, our probe predicts agent performance with r = 0.612 (p < 0.001).

Recommended citation: Hou, D., Jiang, L., Li, D., Li, Z., Lin, F., & Yamada, K. D. (2026). WMF-AM: Probing LLM Working Memory via Depth-Parameterized Cumulative State Tracking. arXiv preprint arXiv:2603.27343.
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Journal Articles


Task-constrained self-initiated attention shifts are indexed by frontal-midline theta ramping

Published in Frontiers in Human Neuroscience, 2025

We investigated the EEG signatures of voluntary, self-initiated attention shifts during visual search. Frontal-midline theta oscillations showed a characteristic ramping pattern prior to attention shifts, reflecting the cognitive demands of self-initiated attentional control.

Recommended citation: Hou, D., Sun, S., Hatori, Y., Tseng, C., & Shioiri, S. (2025). Task-constrained self-initiated attention shifts are indexed by frontal-midline theta ramping. Frontiers in Human Neuroscience.
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EEG Activity Over Ipsilateral and Contralateral M1 During Simple and Complex Hand Tasks: Variations with Motor Learning

Published in Frontiers in Neuroscience, 2025

This study characterized EEG activity over ipsilateral and contralateral primary motor cortex during simple and complex hand tasks, revealing how motor cortex lateralization changes across motor learning.

Recommended citation: Zhao, J., Wang, Y., Hou, D., Négyesi, J., Qiu, D. L., & Nagatomi, R. (2025). EEG activity over ipsilateral and contralateral M1 during simple and complex hand tasks: Variations with motor learning. Frontiers in Neuroscience, 19, 1681250.
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Commonality of neuronal coherence for motor skill acquisition and interlimb transfer

Published in Scientific Reports, 2025

This study identified common neural coherence patterns underlying both motor skill acquisition and interlimb transfer, suggesting shared neurophysiological mechanisms for these two motor learning processes.

Recommended citation: Zhao, J., Wang, Y., Hou, D., Sun, S., Négyesi, J., Inada, H., Shioiri, S., & Nagatomi, R. (2025). Commonality of neuronal coherence for motor skill acquisition and interlimb transfer. Scientific Reports, 15(1), 26276.
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Conference Papers


Physics-Aware Video Instance Removal Benchmark

Published in CVPR 2026 Workshop on Video Generation and Beyond Evaluation (VGBE), 2026

We introduce PVIR, a benchmark of 95 videos with a decoupled human evaluation protocol that reveals current video instance removal methods still treat object erasure as 2D texture filling rather than physics-aware scene reconstruction, particularly failing on complex physical side effects like reflections and shadows.

Recommended citation: Li, Z., Chen, X., Jiang, L., Hou, D., Lin, F., Yamada, K., Gao, X., & Tu, Z. (2026). Physics-Aware Video Instance Removal Benchmark. CVPR 2026 Workshop VGBE.
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